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dictyNews Volume 41 Number 23

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Dicty News
 · 10 months ago

dictyNews 
Electronic Edition
Volume 41, number 23
October 31, 2015

Please submit abstracts of your papers as soon as they have been
accepted for publication by sending them to dicty@northwestern.edu
or by using the form at
http://dictybase.org/db/cgi-bin/dictyBase/abstract_submit.

Back issues of dictyNews, the Dicty Reference database and other
useful information is available at dictyBase - http://dictybase.org.

Follow dictyBase on twitter:
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=========
Abstracts
=========

Reactive oxygen species and mitochondria: A nexus of cellular
homeostasis.

Dan Dunn J1, Alvarez LA2, Zhang X3, Soldati T4.

1Department of Biochemistry, University of Geneva, 30 quai
Ernest Ansermet, Sciences II, CH-1211 Genève-4, Switzerland.
2National Children's Research Centre, Our Lady's Children's
Hospital, Crumlin, Dublin 12, Ireland.
3Department of Biochemistry, University of Geneva, 30 quai
Ernest Ansermet, Sciences II, CH-1211 Genève-4, Switzerland.
4Department of Biochemistry, University of Geneva, 30 quai
Ernest Ansermet, Sciences II, CH-1211 Genève-4, Switzerland.


In: Redox Biol. 2015 Sep 10;6:472-485.

Reactive oxygen species (ROS) are integral components of
multiple cellular pathways even though excessive or
inappropriately localized ROS damage cells. ROS function as
anti-microbial effector molecules and as signaling molecules
that regulate such processes as NF-kB transcriptional activity,
the production of DNA-based neutrophil extracellular traps
(NETs), and autophagy. The main sources of cellular ROS are
mitochondria and NADPH oxidases (NOXs). In contrast to
NOX-generated ROS, ROS produced in the mitochondria
(mtROS) were initially considered to be unwanted by-products
of oxidative metabolism. Increasing evidence indicates that
mtROS have been incorporated into signaling pathways including
those regulating immune responses and autophagy. As metabolic
hubs, mitochondria facilitate crosstalk between the metabolic
state of the cell with these pathways. Mitochondria and ROS
are thus a nexus of multiple pathways that determine the
response of cells to disruptions in cellular homeostasis such
as infection, sterile damage, and metabolic imbalance. In this
review, we discuss the roles of mitochondria in the generation
of ROS-derived anti-microbial effectors, the interplay of
mitochondria and ROS with autophagy and the formation of DNA
extracellular traps, and activation of the NLRP3 inflammasome
by ROS and mitochondria.


Submitted by Thierry Soldati [thierry.soldati@unige.ch]
————————————————————————————————————


Charged Solvatochromic Dyes as Signal Transducers in pH
Independent Fluorescent and Colorimetric Ion Selective
Nanosensors.

Xie X1, Gutiérrez A1,2, Trofimov V2, Szilagyi I1,
Soldati T2, Bakker E1.

1Department of Inorganic and Analytical Chemistry, University
of Geneva , Quai Ernest-Ansermet 30, CH-1211, Geneva,
Switzerland.
2Department of Biochemistry, University of Geneva , Quai
Ernest-Ansermet 30, CH-1211, Geneva, Switzerland.


In: Anal Chem. 2015 Oct 6;87(19):9954-9.

Ionophore-based ion selective optical nanosensors that operate
independently of the sample pH are developed here by the use
of electrically charged solvatochromic dyes as signal
transducers. A series of dye molecules with a D-pi-A structure
was synthesized and characterized in various solvents and
incorporated into ion selective nanospheres for K(+), Na(+),
and H(+). Since dye leakage was greatly suppressed when the
solvatochromic dyes were encapsulated in the nanosphere core,
ion sensing nanospheres were explored for cellular ion imaging
in Dictyostelium discoideum live cells but spontaneous dye
loss resulted in undesired staining of cells. The in vitro analysis
of potassium in human plasma was successfully demonstrated
with this approach. A theoretical model was developed for the
response of the ion selective nanosensors containing charged
solvatochromic dyes. The nanosensors exhibited a tunable
response range, high sensitivity, and good stability.


Submitted by Thierry Soldati [thierry.soldati@unige.ch]
———————————————————————————————————————


Adrenergic antagonists restrict replication of Legionella.

Harrison CF1, Kicka S2, Kranjc A3, Finsel I1, Chiriano G3,
Ouertatani-Sakouhi H4, Soldati T2, Scapozza L3, Hilbi H5.

1 Max von Pettenkofer Institute, Department of Medicine,
Ludwig-Maximilians University Munich, 80336 Munich, Germany.
2 Department of Biochemistry, University of Geneva, 1211
Geneva, Switzerland.
3 School of Pharmaceutical Sciences, Department of
Pharmaceutical Biochemistry, University of Geneva and
University of Lausanne, 1211 Geneva, Switzerland.
4 Faculty of Medicine, University of Geneva, 1211 Geneva,
Switzerland.
5 Institute of Medical Microbiology, Department of Medicine,
University of Zurich, Gloriastrasse 30/32, 8006 Zurich,
Switzerland.


In: Microbiology. 2015 Jul;161(7):1392-406

Legionella pneumophila is a facultative intracellular bacterium,
which upon inhalation can cause a potentially fatal pneumonia
termed Legionnaires' disease. The opportunistic pathogen grows
in environmental amoebae and mammalian macrophages within a
unique membrane-bound compartment, the 'Legionella-containing
vacuole'. Bacteria are exposed to many environmental cues
including small signalling molecules from eukaryotic cells. A
number of pathogenic bacteria sense and respond to catecholamine
hormones, such as adrenalin and noradrenalin, a process mediated
via the QseBC two-component system in some bacteria. In this
study, we examined the effect of adrenergic compounds on
L. pneumophila, and discovered that the adrenergic receptor
antagonists benoxathian, naftopidil, propranolol and labetalol, as
well as the QseC sensor kinase inhibitor LED209, reduced the
growth of L. pneumophila in broth or amoebae, while replication
in macrophages was enhanced. Growth restriction was common to
members of the genus Legionella and Mycobacterium, and was
observed for L. pneumophila in the replicative but not stationary
phase of the biphasic life cycle. Deletion of the L. pneumophila
qseBC genes indicated that growth inhibition by adrenergics or
LED209 is mediated only to a minor extent by this two-component
system, implying the presence of other adrenergic sensing systems.
This study identifies adrenergic molecules as novel inhibitors of
extra- and intracellular growth of Legionella and reveals LED209
as a potential lead compound to combat infections with Legionella
or Mycobacterium spp.


Submitted by Thierry Soldati [thierry.soldati@unige.ch]
———————————————————————————————————————


Live imaging of Mycobacterium marinum infection in Dictyostelium
discoideum.

Barisch C1, López-Jiménez AT, Soldati T.

1Département de Biochimie, Faculté des Sciences, Université de
Genève, Sciences II, 30 Quai Ernest Ansermet, 1211, Genève-4,
Switzerland.


In; Methods Mol Biol. 2015;1285:369-85:

The Dictyostelium discoideum-Mycobacterium marinum host-pathogen
system is a recently established and powerful model system for
mycobacterial infection. In this chapter, two simple protocols for
live imaging of Dictyostelium discoideum infection are described.
The first method is used to monitor the dynamics of recruitment of
GFP-tagged Dictyostelium discoideum proteins at single time-points
corresponding to the main stages of the infection (1.5-72 h post
infection). The second method focuses at the early stages of the
establishment of an infection (0-3 h post infection). In addition,
several procedures to improve the imaging of the bacterium-
containing compartment are described. Basic bacterial parameters
such as bacterial growth and the recruitment of host proteins to
the bacterium-containing compartment can be easily and precisely
quantified using macros for ImageJ. These methods can be adapted
to monitoring mycobacteria infection in other systems using
mammalian cells.


Submitted by Thierry Soldati [thierry.soldati@unige.ch]
==============================================================
[End dictyNews, volume 41, number 23]

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